Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821239.1_cds_XP_016500703.1_14505
CDS Infomation

[gene=LOC107819130] [db_xref=GeneID:107819130] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like isoform X2] [protein_id=XP_016500703.1] [location=join(37370..37432,39621..39887,39973..40050,40133..40234,40316..40365,40465..40564,40664..40756,40844..40936,42790..42877,43748..44127,44228..44302,44386..44436)] [gbkey=CDS]
Sequence

ATGCTAATGTGGTCTGAAATGCTCAACTGGAGGAAAGAACAAGGAGTAGACACTATTATA
CAGGATTTTGAGTATGAGGAATATGAGGAAGTTCAGCGTCATTACCCTCATGGTTACCAT
GGTGTAGACAAAGGGGGACGGCCTGTCTATATTGAAAGACTTGGCAAGATTGAACCTACT
AAACTTATGAATGTTACCACAATAGAAAGGTTCTTGAAGTATCACATCCAAGGGTTTGAA
AGGACTTTTGCTGAAAAATTTCCAGCATGTTCGATTGCAGCTAGGAGGCATATAGATTCA
TCTACTACAATTTTGGATGTTCAAGGACTGAATTGGAGGAGTTTTGGGAAGCTTGCCCAT
GATTTGGTCATGCGCATGCAGAAAATAGATGGCGACAACTACCCAGAGACATTGCACCAG
ATGTTCATTGTCAATGCTGGAAATGGATTCAGATTTCTTTGGAATACTGCTAAAGGATTT
CTTGATCCAAGGACAACAGCGAAGATACATGTATTGGGAAACAAATTCCAGAGTAACTTA
GCAGAAGTCATAGACCCCAGCCAATTGCCAGATTTTCTTGGAGGAACCTGCTCATGCCCA
AATCCAGGTGGGTGTCTTAGGTCTAACAAAGGACCCTGGAATGATCCAGAACTGATGAAG
CTGGTCCTTGCATTACATGGTGAAGCGCTTTATCCCAGGAGAATAACTAGCTTCTCTGAT
AGTGATATCGAAATCAAACCTGTTTCGCCTCAGTTATTAGGCGACGAGATTGGGTCTGCA
GAAACTGAAATGGAAGTGGGGGTCTCTGCTTACAGTATCATCCAATCAAAACCACTTTCT
GACAAAGGACCAACCAGGAGATCTGTTTCATTCGGCAATTTAATTCAAGAAGATCATGGG
CCGATGCCTACAGCTGAGGATTTAAGTTCTCCAAATAGGGCTACTGTAGCACTACAACGA
AGGTCGCCTGAGAAATCTATCGTTGGCTTGATGATTGATATGATGGTCAAATCACTTGCA
TGGATATATTTCTTGTTTCGTGGGGTGGGTAGGTTATTTGTGAAGAACAATGATGCAAAC
AGATTTGGAAACGGGCAGAGATCAGTGAGTGCAAGTTCTGCCGAGCAAATTGTTTCTTCC
CCGAAAAAGGAAGATCTCCTCCATCCATGCTGTCAGAGGTTGCAACATTTAGAGGAGGTG
GTGGCTGATTTGTTGAAGAAACCTACAAAAATTCCTCCTGAAAAAGACCTTATGCTGCTT
GATTCAATGGACCGAATAAAGTTCATAGAGTACGACTTGCAAAGGACGAAGAAGGCACTT
CTTGCAACAGCATCACAACAAGTAGAGCTTGCTGAATCATTGGAATCTTTGAAGGAGAAC
AAGTTTAAAGCGACAAACTCATGTTGGCTGAGAGGCAAGCCTTCTCAATACAGAACTTGA

Peptide Sequence

PEP ID

XP_016500703.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like isoform X2 [Nicotiana tabacum]
Sequence

MLMWSEMLNWRKEQGVDTIIQDFEYEEYEEVQRHYPHGYHGVDKGGRPVYIERLGKIEPT
KLMNVTTIERFLKYHIQGFERTFAEKFPACSIAARRHIDSSTTILDVQGLNWRSFGKLAH
DLVMRMQKIDGDNYPETLHQMFIVNAGNGFRFLWNTAKGFLDPRTTAKIHVLGNKFQSNL
AEVIDPSQLPDFLGGTCSCPNPGGCLRSNKGPWNDPELMKLVLALHGEALYPRRITSFSD
SDIEIKPVSPQLLGDEIGSAETEMEVGVSAYSIIQSKPLSDKGPTRRSVSFGNLIQEDHG
PMPTAEDLSSPNRATVALQRRSPEKSIVGLMIDMMVKSLAWIYFLFRGVGRLFVKNNDAN
RFGNGQRSVSASSAEQIVSSPKKEDLLHPCCQRLQHLEEVVADLLKKPTKIPPEKDLMLL
DSMDRIKFIEYDLQRTKKALLATASQQVELAESLESLKENKFKATNSCWLRGKPSQYRT

Transcript Sequence

Gene sequence data has not been registered.